BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037E02SP1|AL430395
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1305 1732 0.0
>3x_Contig1305
Length = 9229
Score = 1732 bits (873), Expect = 0.0
Identities = 886/891 (99%)
Strand = Plus / Plus
Query: 1 gactattacgtatttggtgctccttgttggattagcagatatgtttctcgtccctcaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gactattacgtatttggtgctccttgttggattagcagatatgtttctcgtccctcaatt 467
Query: 61 tccaaactctactatgatgcaaagtgttatgatccatttcttcctattgggttcggtgct 120
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 468 tccaaactctactatgatgcaaagtgttatgatccatgtcttcctattgggtccggtgct 527
Query: 121 gtgcttaggatgcagcagctttttccattgcttaaagcagcactccgaatcgcattgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gtgcttaggatgcagcagctttttccattgcttaaagcagcactccgaatcgcattgtca 587
Query: 181 tatctggtctaaagtggactacatgggaatcattattatgattacgtgttccattatctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tatctggtctaaagtggactacatgggaatcattattatgattacgtgttccattatctc 647
Query: 241 attgttatactatggattccacgaccacattttccatttcaaatgtttcaccgtattcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 attgttatactatggattccacgaccacattttccatttcaaatgtttcaccgtattcac 707
Query: 301 cgttattctgggaactatctgcactgtgtttgcactacacgacaaatttaactcaaagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 cgttattctgggaactatctgcactgtgtttgcactacacgacaaatttaactcaaagac 767
Query: 361 ttttagacccttcagagcaatgttttacgtgacattcggtttgagtgggatagttccaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ttttagacccttcagagcaatgttttacgtgacattcggtttgagtgggatagttccaat 827
Query: 421 tgttactgggttttggaaatttggtgcatatgaggccattcgcagagttcaattgaagta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 tgttactgggttttggaaatttggtgcatatgaggccattcgcagagttcaattgaagta 887
Query: 481 tgttttgttagaagcgatgttctatattgccggtgcagtgatttacgggttcaggttccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 tgttttgttagaagcgatgttctatattgccggtgcagtgatttacgggttcaggttccc 947
Query: 541 agaagtgttagcgcctgggaaatttgatttcgtcggacactcacatcaaatatttcatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 agaagtgttagcgcctgggaaatttgatttcgtcggacactcacatcaaatatttcatat 1007
Query: 601 aatggtggttttaggctccatctgtcatttcagagccatcctcggatcttatgttttcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 aatggtggttttaggctccatctgtcatttcagagccatcctcggatcttatgttttcat 1067
Query: 661 gcatactggtatgcatcactcgagctttgtcttcataagatgaagagatatgccaatact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 gcatactggtatgcatcactcgagctttgtcttcataagatgaagagatatgccaatact 1127
Query: 721 ttatctcatatatcttaccattcttcttacaagaaatttacacatgaactcatacataaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 ttatctcatatatcttaccattcttcttacaagaaatttacacatgaactcatacataaa 1187
Query: 781 tacagacacacgcgcaasatttagaaagtaaccttaatgggacaatccatcaagtaccgc 840
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 tacagacacacgcgcaagcattagaaagtaaccttaatgggacaatccatcaagtaccgc 1247
Query: 841 agatgttgctacactcggctgattgttggttccgtcgtttgtaacattctc 891
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1248 agatgttgctacactcggctgattgttggttccgtcgtttgtaacattctc 1298
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6225
Number of Sequences: 1807
Number of extensions: 6225
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)